Overview

Biochemistry and food chemistry form one of the most consistently tested areas in UPSC Prelims, particularly vitamins and their deficiency diseases, food preservation techniques, and the basics of biomolecules. This chapter covers the four major classes of biomolecules (carbohydrates, proteins, lipids, and nucleic acids), vitamins and minerals with their deficiency diseases, enzymes, and food safety — including adulteration detection and preservation methods.

Exam Strategy: The vitamin-deficiency disease table is a Prelims favourite — memorise it thoroughly. Questions on food preservation (pasteurisation, irradiation, lyophilisation) and food adulteration (FSSAI role) appear regularly. For Mains GS3, understanding of food security, nutrition programmes, and FSSAI's regulatory framework is valuable.


Carbohydrates

Carbohydrates are organic compounds made of carbon, hydrogen, and oxygen, with the general formula C_x(H₂O)_y. They are the primary source of energy for living organisms.

Classification of Carbohydrates

Type No. of Sugar Units Examples Key Facts
Monosaccharides 1 Glucose (C₆H₁₂O₆), Fructose, Galactose Simplest sugars; cannot be hydrolysed further
Disaccharides 2 Sucrose (glucose + fructose), Lactose (glucose + galactose), Maltose (glucose + glucose) Formed by condensation of two monosaccharides
Oligosaccharides 3–10 Raffinose, Stachyose Found in legumes; can cause flatulence
Polysaccharides Many (100s–1000s) Starch, Glycogen, Cellulose, Chitin Storage and structural functions

Important Polysaccharides

Polysaccharide Found In Function
Starch Plants (potatoes, rice, wheat) Energy storage in plants
Glycogen Animals (liver, muscles) Energy storage in animals ("animal starch")
Cellulose Plant cell walls Structural support; humans cannot digest it (dietary fibre)
Chitin Exoskeleton of arthropods, fungal cell walls Structural polysaccharide
Inulin Chicory root, garlic, onion Prebiotic dietary fibre; used to test kidney function

Prelims Tip: Cellulose is the most abundant organic compound on Earth. Humans lack the enzyme cellulase needed to digest it, but it serves as essential dietary fibre. Ruminants (cows, goats) can digest cellulose because of cellulase-producing bacteria in their rumen.


Proteins

Proteins are polymers of amino acids linked by peptide bonds. They are essential for growth, repair, enzyme activity, immunity, and virtually every biological process.

Amino Acids

  • There are 20 standard amino acids used by the human body
  • Essential amino acids (9) — cannot be synthesised by the body; must be obtained from diet (e.g., leucine, lysine, tryptophan, valine, methionine, phenylalanine, threonine, isoleucine, histidine)
  • Non-essential amino acids (11) — can be synthesised by the body

Protein Structure

Level Description
Primary Linear sequence of amino acids in a polypeptide chain
Secondary Local folding into alpha-helix or beta-sheet structures
Tertiary 3D shape of the entire polypeptide chain
Quaternary Association of two or more polypeptide chains (e.g., haemoglobin has 4 subunits)

Denaturation

Denaturation is the loss of a protein's 3D structure (and hence its biological function) due to heat, pH change, or chemical agents. Example: cooking an egg causes the albumin protein to denature (it turns white and solid).

Types of Proteins by Function

Type Function Examples
Structural Provide support and shape Collagen (connective tissue), Keratin (hair, nails)
Enzymatic Catalyse biochemical reactions Amylase, Pepsin, DNA polymerase
Transport Carry molecules Haemoglobin (oxygen), Albumin (fatty acids)
Hormonal Chemical messengers Insulin, Growth hormone
Defensive Immune protection Antibodies (immunoglobulins)
Contractile Movement Actin, Myosin (muscle contraction)

Lipids (Fats and Oils)

Lipids are hydrophobic biomolecules that include fats, oils, waxes, and steroids. They serve as energy reserves, insulation, and components of cell membranes.

Types of Fatty Acids

Type Chemical Feature State at Room Temp Sources Health Impact
Saturated No C=C double bonds Solid (fats) Butter, ghee, coconut oil, animal fat Excess raises LDL cholesterol
Monounsaturated (MUFA) One C=C double bond Liquid (oils) Olive oil, mustard oil, groundnut oil Heart-healthy; lowers LDL
Polyunsaturated (PUFA) Two or more C=C double bonds Liquid (oils) Sunflower oil, soybean oil, fish oil Contains omega-3 and omega-6
Trans fats Artificially hydrogenated unsaturated fats Solid Vanaspati, margarine, processed foods Most harmful; raises LDL, lowers HDL

Important: FSSAI has capped trans fat content in oils and fats at 2% (effective from 1 January 2022), aligning with WHO recommendations. India became one of the first countries to adopt this stringent limit. Trans fats are linked to cardiovascular disease.

Cholesterol

  • A type of lipid (steroid) essential for cell membrane structure, vitamin D synthesis, and hormone production
  • HDL (High-Density Lipoprotein) — "good cholesterol"; removes cholesterol from arteries
  • LDL (Low-Density Lipoprotein) — "bad cholesterol"; deposits cholesterol in artery walls

Vitamins

Vitamins are organic compounds required in small quantities for normal metabolic functioning. The body generally cannot synthesise them (except vitamin D and vitamin K in limited amounts), so they must be obtained from the diet.

Fat-Soluble Vitamins (A, D, E, K)

These dissolve in fat, are stored in the liver and adipose tissue, and do not need daily replenishment.

Vitamin Chemical Name Major Sources Deficiency Disease Key Function
A Retinol Carrot, spinach, liver, milk, eggs, fish Night blindness, Xerophthalmia (dry eyes, corneal damage) Vision, immune function, skin health
D Calciferol Sunlight, fish liver oil, egg yolk, fortified milk Rickets (children), Osteomalacia (adults) Calcium absorption, bone growth
E Tocopherol Vegetable oils, nuts, seeds, green leafy vegetables Haemolytic anaemia, nerve damage (rare) Antioxidant, protects cell membranes
K Phylloquinone (K₁), Menaquinone (K₂) Green leafy vegetables, soybean oil; K₂ produced by gut bacteria Excessive bleeding, poor blood clotting Blood clotting (synthesis of prothrombin)

Water-Soluble Vitamins (B-complex and C)

These dissolve in water, are not stored in the body (except B₁₂), and must be consumed regularly.

Vitamin Chemical Name Major Sources Deficiency Disease Key Function
B₁ Thiamine Whole grains, legumes, pork, nuts Beriberi (nerve and heart damage) Carbohydrate metabolism
B₂ Riboflavin Milk, eggs, green vegetables, liver Ariboflavinosis (cracked lips, sore throat) Energy production, cell function
B₃ Niacin Meat, fish, groundnuts, whole grains Pellagra (dermatitis, diarrhoea, dementia — the "3 Ds") NAD/NADP synthesis, energy metabolism
B₅ Pantothenic Acid Meat, eggs, broccoli, avocados Fatigue, numbness (rare) Coenzyme A synthesis
B₆ Pyridoxine Poultry, fish, potatoes, bananas Anaemia, dermatitis, confusion Amino acid metabolism, haemoglobin synthesis
B₇ Biotin Egg yolk, nuts, soybeans, liver Dermatitis, hair loss (rare) Fat and carbohydrate metabolism
B₉ Folic Acid Dark green leafy vegetables, legumes, citrus, liver Megaloblastic anaemia, neural tube defects in foetus DNA synthesis, cell division
B₁₂ Cyanocobalamin Meat, fish, eggs, dairy (not in plant foods) Pernicious anaemia, nerve damage Red blood cell formation, nerve function
C Ascorbic Acid Citrus fruits, amla, guava, tomato, capsicum Scurvy (bleeding gums, skin spots, joint pain) Collagen synthesis, antioxidant, iron absorption

Mnemonic for Pellagra (B₃ deficiency): The "3 Ds" — Dermatitis, Diarrhoea, Dementia. If untreated, a 4th D — Death.

Key Distinction: Vitamin B₁₂ is the only water-soluble vitamin stored in the body (in the liver, for up to 3–5 years). It is also the only vitamin that contains a metal ion (cobalt). Strict vegetarians/vegans are at risk of B₁₂ deficiency since it is absent in plant-based foods.


Minerals

Minerals are inorganic elements essential for various physiological functions.

Mineral Major Sources Deficiency Disease / Effect Key Function
Iron (Fe) Spinach, liver, red meat, jaggery, dates Anaemia (fatigue, pallor, weakness) Haemoglobin synthesis, oxygen transport
Calcium (Ca) Milk, cheese, ragi, green leafy vegetables Osteoporosis, rickets (with Vitamin D deficiency) Bone and teeth formation, muscle contraction, nerve signalling
Iodine (I) Iodised salt, seafood, seaweed Goitre (enlarged thyroid), Cretinism (in children) Thyroid hormone (T₃, T₄) synthesis
Zinc (Zn) Meat, shellfish, legumes, seeds, nuts Stunted growth, impaired immunity, delayed wound healing Enzyme function, immune response, wound healing
Phosphorus (P) Dairy, fish, meat, nuts Weak bones and teeth (rare) Bone structure, ATP synthesis, DNA/RNA
Sodium (Na) Table salt, processed foods Hyponatremia (muscle cramps, confusion) Fluid balance, nerve impulse transmission
Potassium (K) Banana, potato, coconut water, spinach Hypokalaemia (muscle weakness, heart irregularities) Nerve and muscle function, fluid balance
Fluorine (F) Fluoridated water, tea, fish Dental caries (too little); Fluorosis (excess — mottled teeth, bone deformities) Strengthens tooth enamel

Prelims Alert: India's National Goitre Control Programme (renamed National Iodine Deficiency Disorders Control Programme — NIDDCP) mandates the use of iodised salt. Iodine deficiency is the most common cause of preventable intellectual disability worldwide.


Enzymes

What Are Enzymes?

Enzymes are biological catalysts — proteins that speed up chemical reactions in living organisms without being consumed in the process. They lower the activation energy required for a reaction.

Key Properties of Enzymes

Property Detail
Specificity Each enzyme acts on a specific substrate (lock-and-key model)
Optimal pH Most enzymes work best at a specific pH (pepsin: pH 2, trypsin: pH 8)
Optimal Temperature Most human enzymes work best at 37 °C; denatured at high temperatures
Reusability Enzymes are not consumed; they can be used repeatedly
Naming Usually named after substrate + "-ase" suffix (e.g., lipase breaks down lipids)

Important Digestive Enzymes

Enzyme Source Substrate Product
Salivary Amylase (Ptyalin) Saliva (mouth) Starch Maltose
Pepsin Stomach (gastric juice) Proteins Peptides
Trypsin Pancreas (small intestine) Proteins Peptides and amino acids
Lipase Pancreas Fats (lipids) Fatty acids + Glycerol
Lactase Small intestine Lactose Glucose + Galactose
Sucrase Small intestine Sucrose Glucose + Fructose

Key Concept: Lactose intolerance occurs when the body produces insufficient lactase enzyme, making it unable to digest lactose (milk sugar). It is common in adults, especially in East Asian and some Indian populations.

Industrial Applications of Enzymes

Application Enzyme Used
Brewing and baking (fermentation) Zymase (from yeast)
Cheese making Rennet (rennin)
Biological detergents Protease, lipase, amylase
Tenderising meat Papain (from papaya)
Contact lens cleaning solutions Protease
Biofuel production Cellulase

Nucleic Acids — DNA and RNA Basics

DNA (Deoxyribonucleic Acid)

Feature Detail
Structure Double helix (discovered by Watson and Crick, 1953; X-ray data by Rosalind Franklin)
Sugar Deoxyribose
Bases Adenine (A), Thymine (T), Guanine (G), Cytosine (C)
Base Pairing A=T (2 hydrogen bonds), G≡C (3 hydrogen bonds)
Function Stores genetic information; blueprint for protein synthesis
Location Nucleus (mainly), mitochondria, chloroplasts

RNA (Ribonucleic Acid)

Feature Detail
Structure Single-stranded (usually)
Sugar Ribose
Bases Adenine (A), Uracil (U), Guanine (G), Cytosine (C)
Types mRNA (messenger), tRNA (transfer), rRNA (ribosomal)
Function Reads genetic code from DNA and translates it into proteins

Prelims Tip: Chargaff's rule states that in DNA, the amount of adenine equals thymine (A = T) and guanine equals cytosine (G = C). This rule does not apply to single-stranded RNA.


Food Adulteration and FSSAI

Food Safety and Standards Authority of India (FSSAI)

Detail Information
Established 2006, under the Food Safety and Standards Act, 2006
Operational 2011 (replaced the Prevention of Food Adulteration Act, 1954)
Mandate Lay down science-based food safety standards; regulate manufacture, storage, distribution, sale, and import of food
Parent Ministry Ministry of Health and Family Welfare
Logo/Mark FSSAI license number on packaged food; "Eat Right India" campaign

Common Food Adulterants

Food Item Common Adulterant Detection Method
Milk Water, starch, urea, detergent Lactometer (water); iodine test (starch)
Honey Sugar syrup, jaggery Dissolve in water — pure honey does not dissolve easily
Turmeric Metanil yellow (toxic dye), lead chromate Add HCl — adulterated turmeric turns pink/violet
Chilli powder Brick powder, Sudan dye Add water — brick powder settles; chemical tests for dyes
Mustard seeds Argemone seeds Visual inspection (argemone seeds are rough, dark)
Tea Used tea leaves, iron filings Magnet test (iron); colour test on damp paper
Ghee Vanaspati, animal fat Baudouin test (for sesame oil in vanaspati)

Food Preservation Methods

Food preservation prevents microbial growth and spoilage, extending shelf life.

Method Principle Examples
Refrigeration / Freezing Low temperature slows microbial growth and enzyme activity Home refrigerators (2–8 °C), deep freezing (−18 °C)
Pasteurisation Heating to a specific temperature for a set time to kill pathogens without altering taste Milk (72 °C for 15 seconds — HTST method), fruit juices
Sterilisation Heating to high temperature to kill all microorganisms Canned foods (121 °C at 15 psi in autoclave)
Dehydration / Drying Removing moisture to prevent microbial growth Sun-drying (fish, grains), spray drying (milk powder)
Lyophilisation (Freeze-Drying) Freezing followed by vacuum sublimation of ice Instant coffee, astronaut food, vaccines
Canning Sealing food in airtight containers after heat treatment Canned fruits, vegetables, fish (invented by Nicolas Appert, 1810)
Salting / Sugaring High salt/sugar concentration causes osmotic dehydration of microbes Pickles (salt), jams and jellies (sugar)
Smoking Smoke contains antimicrobial chemicals (formaldehyde, phenols) Smoked fish, smoked meat
Chemical Preservatives Added chemicals inhibit microbial growth Sodium benzoate (soft drinks), potassium sorbate, vinegar (acetic acid)
Food Irradiation Controlled exposure to ionising radiation (gamma rays, electron beams, X-rays) destroys microorganisms Spices, onions, potatoes (approved in India since 1994, expanded 1998, 2001); does NOT make food radioactive
Vacuum Packing Removing air prevents aerobic microbial growth Meat, cheese, nuts
Fermentation Controlled microbial action produces acids or alcohol that preserve food Yoghurt (lactic acid), wine (alcohol), sauerkraut, kimchi

Prelims Tip: Pasteurisation is named after French microbiologist Louis Pasteur. The HTST (High Temperature Short Time) method heats milk to 72 °C for 15 seconds and then rapidly cools it. UHT (Ultra-High Temperature) processing heats milk to 135–150 °C for 2–5 seconds, allowing storage without refrigeration for months.

Key Distinction: Food irradiation does NOT make food radioactive. It uses gamma rays (from Cobalt-60 or Caesium-137), electron beams, or X-rays to destroy bacteria, parasites, and insects. India approved irradiation of onions, potatoes, and spices for the domestic market in 1994.


Frequently Asked Questions (Prelims Pattern)

Question Answer
Which vitamin deficiency causes scurvy? Vitamin C (Ascorbic Acid)
Which vitamin deficiency causes night blindness? Vitamin A (Retinol)
What is the "3 Ds" disease from B₃ deficiency? Pellagra (Dermatitis, Diarrhoea, Dementia)
Which is the only water-soluble vitamin stored in the body? Vitamin B₁₂ (Cyanocobalamin)
What is the most abundant organic compound on Earth? Cellulose
What is denaturation of protein? Loss of 3D structure due to heat, pH change, or chemicals
Which enzyme digests starch in the mouth? Salivary amylase (ptyalin)
What is pasteurisation? Heating milk to 72 °C for 15 seconds (HTST) to kill pathogens
What is lyophilisation? Freeze-drying — preserving by freezing and vacuum sublimation
What is FSSAI's parent ministry? Ministry of Health and Family Welfare
Which mineral deficiency causes goitre? Iodine
What are trans fats? Artificially hydrogenated unsaturated fats; most harmful to heart health

Key Terms for Quick Revision

Term Meaning
Monosaccharide Simplest sugar unit (e.g., glucose, fructose); cannot be hydrolysed further
Polysaccharide Long chain of sugar units (e.g., starch, cellulose, glycogen)
Amino Acid Building block of proteins; 20 standard types, 9 essential
Peptide Bond Covalent bond linking two amino acids in a protein chain
Denaturation Loss of protein's native 3D structure and biological function
Enzyme Biological catalyst that speeds up reactions without being consumed
Substrate The specific molecule on which an enzyme acts
Saturated Fat Fat with no double bonds between carbon atoms; solid at room temperature
Trans Fat Artificially hydrogenated fat; raises LDL and lowers HDL cholesterol
Vitamin Organic compound required in small amounts for metabolic functions
FSSAI Food Safety and Standards Authority of India; regulates food safety since 2011
Pasteurisation Heat treatment (72 °C, 15 s) to kill pathogens in milk and beverages
Lyophilisation Freeze-drying; preservation by freezing followed by vacuum sublimation
Food Irradiation Exposure to ionising radiation to kill microorganisms; does not make food radioactive
Nucleic Acid DNA or RNA; polymers of nucleotides that carry genetic information

Sources: Wikipedia; Britannica; FSSAI (fssai.gov.in); PMC (NCBI); PIB (pib.gov.in); PMF IAS; BYJU'S Biology.