Overview

Biochemistry and food chemistry form one of the most consistently tested areas in UPSC Prelims, particularly vitamins and their deficiency diseases, food preservation techniques, and the basics of biomolecules. This chapter covers the four major classes of biomolecules (carbohydrates, proteins, lipids, and nucleic acids), vitamins and minerals with their deficiency diseases, enzymes, and food safety — including adulteration detection and preservation methods.

Exam Strategy: The vitamin-deficiency disease table is a Prelims favourite — memorise it thoroughly. Questions on food preservation (pasteurisation, irradiation, lyophilisation) and food adulteration (FSSAI role) appear regularly. For Mains GS3, understanding of food security, nutrition programmes, and FSSAI's regulatory framework is valuable.


Carbohydrates

Carbohydrates are organic compounds made of carbon, hydrogen, and oxygen, with the general formula C_x(H₂O)_y. They are the primary source of energy for living organisms.

Classification of Carbohydrates

TypeNo. of Sugar UnitsExamplesKey Facts
Monosaccharides1Glucose (C₆H₁₂O₆), Fructose, GalactoseSimplest sugars; cannot be hydrolysed further
Disaccharides2Sucrose (glucose + fructose), Lactose (glucose + galactose), Maltose (glucose + glucose)Formed by condensation of two monosaccharides
Oligosaccharides3–10Raffinose, StachyoseFound in legumes; can cause flatulence
PolysaccharidesMany (100s–1000s)Starch, Glycogen, Cellulose, ChitinStorage and structural functions

Important Polysaccharides

PolysaccharideFound InFunction
StarchPlants (potatoes, rice, wheat)Energy storage in plants
GlycogenAnimals (liver, muscles)Energy storage in animals ("animal starch")
CellulosePlant cell wallsStructural support; humans cannot digest it (dietary fibre)
ChitinExoskeleton of arthropods, fungal cell wallsStructural polysaccharide
InulinChicory root, garlic, onionPrebiotic dietary fibre; used to test kidney function

Prelims Tip: Cellulose is the most abundant organic compound on Earth. Humans lack the enzyme cellulase needed to digest it, but it serves as essential dietary fibre. Ruminants (cows, goats) can digest cellulose because of cellulase-producing bacteria in their rumen.


Proteins

Proteins are polymers of amino acids linked by peptide bonds. They are essential for growth, repair, enzyme activity, immunity, and virtually every biological process.

Amino Acids

  • There are 20 standard amino acids used by the human body
  • Essential amino acids (9) — cannot be synthesised by the body; must be obtained from diet (e.g., leucine, lysine, tryptophan, valine, methionine, phenylalanine, threonine, isoleucine, histidine)
  • Non-essential amino acids (11) — can be synthesised by the body

Protein Structure

LevelDescription
PrimaryLinear sequence of amino acids in a polypeptide chain
SecondaryLocal folding into alpha-helix or beta-sheet structures
Tertiary3D shape of the entire polypeptide chain
QuaternaryAssociation of two or more polypeptide chains (e.g., haemoglobin has 4 subunits)

Denaturation

Denaturation is the loss of a protein's 3D structure (and hence its biological function) due to heat, pH change, or chemical agents. Example: cooking an egg causes the albumin protein to denature (it turns white and solid).

Types of Proteins by Function

TypeFunctionExamples
StructuralProvide support and shapeCollagen (connective tissue), Keratin (hair, nails)
EnzymaticCatalyse biochemical reactionsAmylase, Pepsin, DNA polymerase
TransportCarry moleculesHaemoglobin (oxygen), Albumin (fatty acids)
HormonalChemical messengersInsulin, Growth hormone
DefensiveImmune protectionAntibodies (immunoglobulins)
ContractileMovementActin, Myosin (muscle contraction)

Lipids (Fats and Oils)

Lipids are hydrophobic biomolecules that include fats, oils, waxes, and steroids. They serve as energy reserves, insulation, and components of cell membranes.

Types of Fatty Acids

TypeChemical FeatureState at Room TempSourcesHealth Impact
SaturatedNo C=C double bondsSolid (fats)Butter, ghee, coconut oil, animal fatExcess raises LDL cholesterol
Monounsaturated (MUFA)One C=C double bondLiquid (oils)Olive oil, mustard oil, groundnut oilHeart-healthy; lowers LDL
Polyunsaturated (PUFA)Two or more C=C double bondsLiquid (oils)Sunflower oil, soybean oil, fish oilContains omega-3 and omega-6
Trans fatsArtificially hydrogenated unsaturated fatsSolidVanaspati, margarine, processed foodsMost harmful; raises LDL, lowers HDL

Important: FSSAI has capped trans fat content in oils and fats at 2% (effective from 1 January 2022), aligning with WHO recommendations. India became one of the first countries to adopt this stringent limit. Trans fats are linked to cardiovascular disease.

Cholesterol

  • A type of lipid (steroid) essential for cell membrane structure, vitamin D synthesis, and hormone production
  • HDL (High-Density Lipoprotein) — "good cholesterol"; removes cholesterol from arteries
  • LDL (Low-Density Lipoprotein) — "bad cholesterol"; deposits cholesterol in artery walls

Vitamins

Vitamins are organic compounds required in small quantities for normal metabolic functioning. The body generally cannot synthesise them (except vitamin D and vitamin K in limited amounts), so they must be obtained from the diet.

Fat-Soluble Vitamins (A, D, E, K)

These dissolve in fat, are stored in the liver and adipose tissue, and do not need daily replenishment.

VitaminChemical NameMajor SourcesDeficiency DiseaseKey Function
ARetinolCarrot, spinach, liver, milk, eggs, fishNight blindness, Xerophthalmia (dry eyes, corneal damage)Vision, immune function, skin health
DCalciferolSunlight, fish liver oil, egg yolk, fortified milkRickets (children), Osteomalacia (adults)Calcium absorption, bone growth
ETocopherolVegetable oils, nuts, seeds, green leafy vegetablesHaemolytic anaemia, nerve damage (rare)Antioxidant, protects cell membranes
KPhylloquinone (K₁), Menaquinone (K₂)Green leafy vegetables, soybean oil; K₂ produced by gut bacteriaExcessive bleeding, poor blood clottingBlood clotting (synthesis of prothrombin)

Water-Soluble Vitamins (B-complex and C)

These dissolve in water, are not stored in the body (except B₁₂), and must be consumed regularly.

VitaminChemical NameMajor SourcesDeficiency DiseaseKey Function
B₁ThiamineWhole grains, legumes, pork, nutsBeriberi (nerve and heart damage)Carbohydrate metabolism
B₂RiboflavinMilk, eggs, green vegetables, liverAriboflavinosis (cracked lips, sore throat)Energy production, cell function
B₃NiacinMeat, fish, groundnuts, whole grainsPellagra (dermatitis, diarrhoea, dementia — the "3 Ds")NAD/NADP synthesis, energy metabolism
B₅Pantothenic AcidMeat, eggs, broccoli, avocadosFatigue, numbness (rare)Coenzyme A synthesis
B₆PyridoxinePoultry, fish, potatoes, bananasAnaemia, dermatitis, confusionAmino acid metabolism, haemoglobin synthesis
B₇BiotinEgg yolk, nuts, soybeans, liverDermatitis, hair loss (rare)Fat and carbohydrate metabolism
B₉Folic AcidDark green leafy vegetables, legumes, citrus, liverMegaloblastic anaemia, neural tube defects in foetusDNA synthesis, cell division
B₁₂CyanocobalaminMeat, fish, eggs, dairy (not in plant foods)Pernicious anaemia, nerve damageRed blood cell formation, nerve function
CAscorbic AcidCitrus fruits, amla, guava, tomato, capsicumScurvy (bleeding gums, skin spots, joint pain)Collagen synthesis, antioxidant, iron absorption

Mnemonic for Pellagra (B₃ deficiency): The "3 Ds" — Dermatitis, Diarrhoea, Dementia. If untreated, a 4th D — Death.

Key Distinction: Vitamin B₁₂ is the only water-soluble vitamin stored in the body (in the liver, for up to 3–5 years). It is also the only vitamin that contains a metal ion (cobalt). Strict vegetarians/vegans are at risk of B₁₂ deficiency since it is absent in plant-based foods.


Minerals

Minerals are inorganic elements essential for various physiological functions.

MineralMajor SourcesDeficiency Disease / EffectKey Function
Iron (Fe)Spinach, liver, red meat, jaggery, datesAnaemia (fatigue, pallor, weakness)Haemoglobin synthesis, oxygen transport
Calcium (Ca)Milk, cheese, ragi, green leafy vegetablesOsteoporosis, rickets (with Vitamin D deficiency)Bone and teeth formation, muscle contraction, nerve signalling
Iodine (I)Iodised salt, seafood, seaweedGoitre (enlarged thyroid), Cretinism (in children)Thyroid hormone (T₃, T₄) synthesis
Zinc (Zn)Meat, shellfish, legumes, seeds, nutsStunted growth, impaired immunity, delayed wound healingEnzyme function, immune response, wound healing
Phosphorus (P)Dairy, fish, meat, nutsWeak bones and teeth (rare)Bone structure, ATP synthesis, DNA/RNA
Sodium (Na)Table salt, processed foodsHyponatremia (muscle cramps, confusion)Fluid balance, nerve impulse transmission
Potassium (K)Banana, potato, coconut water, spinachHypokalaemia (muscle weakness, heart irregularities)Nerve and muscle function, fluid balance
Fluorine (F)Fluoridated water, tea, fishDental caries (too little); Fluorosis (excess — mottled teeth, bone deformities)Strengthens tooth enamel

Prelims Alert: India's National Goitre Control Programme (renamed National Iodine Deficiency Disorders Control Programme — NIDDCP) mandates the use of iodised salt. Iodine deficiency is the most common cause of preventable intellectual disability worldwide.


Enzymes

What Are Enzymes?

Enzymes are biological catalysts — proteins that speed up chemical reactions in living organisms without being consumed in the process. They lower the activation energy required for a reaction.

Key Properties of Enzymes

PropertyDetail
SpecificityEach enzyme acts on a specific substrate (lock-and-key model)
Optimal pHMost enzymes work best at a specific pH (pepsin: pH 2, trypsin: pH 8)
Optimal TemperatureMost human enzymes work best at 37 °C; denatured at high temperatures
ReusabilityEnzymes are not consumed; they can be used repeatedly
NamingUsually named after substrate + "-ase" suffix (e.g., lipase breaks down lipids)

Important Digestive Enzymes

EnzymeSourceSubstrateProduct
Salivary Amylase (Ptyalin)Saliva (mouth)StarchMaltose
PepsinStomach (gastric juice)ProteinsPeptides
TrypsinPancreas (small intestine)ProteinsPeptides and amino acids
LipasePancreasFats (lipids)Fatty acids + Glycerol
LactaseSmall intestineLactoseGlucose + Galactose
SucraseSmall intestineSucroseGlucose + Fructose

Key Concept: Lactose intolerance occurs when the body produces insufficient lactase enzyme, making it unable to digest lactose (milk sugar). It is common in adults, especially in East Asian and some Indian populations.

Industrial Applications of Enzymes

ApplicationEnzyme Used
Brewing and baking (fermentation)Zymase (from yeast)
Cheese makingRennet (rennin)
Biological detergentsProtease, lipase, amylase
Tenderising meatPapain (from papaya)
Contact lens cleaning solutionsProtease
Biofuel productionCellulase

Nucleic Acids — DNA and RNA Basics

DNA (Deoxyribonucleic Acid)

FeatureDetail
StructureDouble helix (discovered by Watson and Crick, 1953; X-ray data by Rosalind Franklin)
SugarDeoxyribose
BasesAdenine (A), Thymine (T), Guanine (G), Cytosine (C)
Base PairingA=T (2 hydrogen bonds), G≡C (3 hydrogen bonds)
FunctionStores genetic information; blueprint for protein synthesis
LocationNucleus (mainly), mitochondria, chloroplasts

RNA (Ribonucleic Acid)

FeatureDetail
StructureSingle-stranded (usually)
SugarRibose
BasesAdenine (A), Uracil (U), Guanine (G), Cytosine (C)
TypesmRNA (messenger), tRNA (transfer), rRNA (ribosomal)
FunctionReads genetic code from DNA and translates it into proteins

Prelims Tip: Chargaff's rule states that in DNA, the amount of adenine equals thymine (A = T) and guanine equals cytosine (G = C). This rule does not apply to single-stranded RNA.


Food Adulteration and FSSAI

Food Safety and Standards Authority of India (FSSAI)

DetailInformation
Established2006, under the Food Safety and Standards Act, 2006
Operational2011 (replaced the Prevention of Food Adulteration Act, 1954)
MandateLay down science-based food safety standards; regulate manufacture, storage, distribution, sale, and import of food
Parent MinistryMinistry of Health and Family Welfare
Logo/MarkFSSAI license number on packaged food; "Eat Right India" campaign

Common Food Adulterants

Food ItemCommon AdulterantDetection Method
MilkWater, starch, urea, detergentLactometer (water); iodine test (starch)
HoneySugar syrup, jaggeryDissolve in water — pure honey does not dissolve easily
TurmericMetanil yellow (toxic dye), lead chromateAdd HCl — adulterated turmeric turns pink/violet
Chilli powderBrick powder, Sudan dyeAdd water — brick powder settles; chemical tests for dyes
Mustard seedsArgemone seedsVisual inspection (argemone seeds are rough, dark)
TeaUsed tea leaves, iron filingsMagnet test (iron); colour test on damp paper
GheeVanaspati, animal fatBaudouin test (for sesame oil in vanaspati)

Food Preservation Methods

Food preservation prevents microbial growth and spoilage, extending shelf life.

MethodPrincipleExamples
Refrigeration / FreezingLow temperature slows microbial growth and enzyme activityHome refrigerators (2–8 °C), deep freezing (−18 °C)
PasteurisationHeating to a specific temperature for a set time to kill pathogens without altering tasteMilk (72 °C for 15 seconds — HTST method), fruit juices
SterilisationHeating to high temperature to kill all microorganismsCanned foods (121 °C at 15 psi in autoclave)
Dehydration / DryingRemoving moisture to prevent microbial growthSun-drying (fish, grains), spray drying (milk powder)
Lyophilisation (Freeze-Drying)Freezing followed by vacuum sublimation of iceInstant coffee, astronaut food, vaccines
CanningSealing food in airtight containers after heat treatmentCanned fruits, vegetables, fish (invented by Nicolas Appert, 1810)
Salting / SugaringHigh salt/sugar concentration causes osmotic dehydration of microbesPickles (salt), jams and jellies (sugar)
SmokingSmoke contains antimicrobial chemicals (formaldehyde, phenols)Smoked fish, smoked meat
Chemical PreservativesAdded chemicals inhibit microbial growthSodium benzoate (soft drinks), potassium sorbate, vinegar (acetic acid)
Food IrradiationControlled exposure to ionising radiation (gamma rays, electron beams, X-rays) destroys microorganismsSpices, onions, potatoes (approved in India since 1994, expanded 1998, 2001); does NOT make food radioactive
Vacuum PackingRemoving air prevents aerobic microbial growthMeat, cheese, nuts
FermentationControlled microbial action produces acids or alcohol that preserve foodYoghurt (lactic acid), wine (alcohol), sauerkraut, kimchi

Prelims Tip: Pasteurisation is named after French microbiologist Louis Pasteur. The HTST (High Temperature Short Time) method heats milk to 72 °C for 15 seconds and then rapidly cools it. UHT (Ultra-High Temperature) processing heats milk to 135–150 °C for 2–5 seconds, allowing storage without refrigeration for months.

Key Distinction: Food irradiation does NOT make food radioactive. It uses gamma rays (from Cobalt-60 or Caesium-137), electron beams, or X-rays to destroy bacteria, parasites, and insects. India approved irradiation of onions, potatoes, and spices for the domestic market in 1994.


Frequently Asked Questions (Prelims Pattern)

QuestionAnswer
Which vitamin deficiency causes scurvy?Vitamin C (Ascorbic Acid)
Which vitamin deficiency causes night blindness?Vitamin A (Retinol)
What is the "3 Ds" disease from B₃ deficiency?Pellagra (Dermatitis, Diarrhoea, Dementia)
Which is the only water-soluble vitamin stored in the body?Vitamin B₁₂ (Cyanocobalamin)
What is the most abundant organic compound on Earth?Cellulose
What is denaturation of protein?Loss of 3D structure due to heat, pH change, or chemicals
Which enzyme digests starch in the mouth?Salivary amylase (ptyalin)
What is pasteurisation?Heating milk to 72 °C for 15 seconds (HTST) to kill pathogens
What is lyophilisation?Freeze-drying — preserving by freezing and vacuum sublimation
What is FSSAI's parent ministry?Ministry of Health and Family Welfare
Which mineral deficiency causes goitre?Iodine
What are trans fats?Artificially hydrogenated unsaturated fats; most harmful to heart health

Recent Developments (2024–2026)

ICMR-NIN Dietary Guidelines 2024 — Biochemistry of Optimal Nutrition

ICMR and the National Institute of Nutrition (NIN) released updated Dietary Guidelines for Indians in 2024 with 17 evidence-based recommendations. Key biochemistry connections: limit salt (NaCl) to under 5 g/day to reduce hypertension risk (sodium-potassium pump regulation); minimise ultra-processed foods high in trans-fatty acids (artificial trans-fats: partially hydrogenated vegetable oils — linked to cardiovascular disease); ensure adequate protein from diverse sources (complete vs incomplete amino acid profiles); and emphasise complex carbohydrates (lower glycaemic index — slower glucose release, better insulin response).

UPSC angle: ICMR-NIN 2024 guidelines connect biochemistry directly to India's nutrition policy — essential for both Prelims (specific vitamin deficiencies, recommended intakes) and Mains (food security, NCD prevention).

India's Drug Discovery — Enmetazobactam FDA Approval (2024)

In early 2024, Indian pharmaceutical company Orchid made history as the first Indian firm to receive simultaneous FDA (USA) and EMA (Europe) approval for an indigenously discovered novel drug — enmetazobactam, a beta-lactamase inhibitor combating antimicrobial resistance. This demonstrates India's growing capability in original biochemical research and drug discovery, moving beyond generics. India's bioeconomy reached USD 165.7 billion in 2024.

UPSC angle: Orchid's enmetazobactam approval is India's first original FDA-approved drug discovery — connects biochemistry (enzyme inhibition, beta-lactamase mechanism) to India's pharmaceutical sector achievement.


Key Terms for Quick Revision

TermMeaning
MonosaccharideSimplest sugar unit (e.g., glucose, fructose); cannot be hydrolysed further
PolysaccharideLong chain of sugar units (e.g., starch, cellulose, glycogen)
Amino AcidBuilding block of proteins; 20 standard types, 9 essential
Peptide BondCovalent bond linking two amino acids in a protein chain
DenaturationLoss of protein's native 3D structure and biological function
EnzymeBiological catalyst that speeds up reactions without being consumed
SubstrateThe specific molecule on which an enzyme acts
Saturated FatFat with no double bonds between carbon atoms; solid at room temperature
Trans FatArtificially hydrogenated fat; raises LDL and lowers HDL cholesterol
VitaminOrganic compound required in small amounts for metabolic functions
FSSAIFood Safety and Standards Authority of India; regulates food safety since 2011
PasteurisationHeat treatment (72 °C, 15 s) to kill pathogens in milk and beverages
LyophilisationFreeze-drying; preservation by freezing followed by vacuum sublimation
Food IrradiationExposure to ionising radiation to kill microorganisms; does not make food radioactive
Nucleic AcidDNA or RNA; polymers of nucleotides that carry genetic information

Sources: Wikipedia; Britannica; FSSAI (fssai.gov.in); PMC (NCBI); PIB (pib.gov.in); PMF IAS; BYJU'S Biology.